Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs17432011 chr10:43479422 A/G 5.14E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs17432429 chr10:43524234 A/G 3.88E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs17432456 chr10:43524373 C/T 5.67E-5 289 25.63 26.4 11.43 KM Plot
KIRP rs17432532 chr10:43524628 A/C 4.31E-5 289 11.43 25.95 25.67 KM Plot
KIRP rs17432714 chr10:43526023 A/C 2.79E-5 289 25.62 26.52 11.43 KM Plot
KIRP rs17432763 chr10:43531949 A/G 6.23E-5 289 11.43 23.63 25.93 KM Plot
KIRP rs17432833 chr10:43532175 G/A 4.13E-5 289 25.63 26.4 11.43 KM Plot
KIRP rs17506467 chr1:59001834 G/A 2.38E-5 288 25.6 27.45 13.17 KM Plot
KIRP rs17516312 chr10:43083671 C/T 6.84E-5 289 11.43 27.75 25.4 KM Plot
KIRP rs17599750 chr2:128491880 G/A 1.2E-6 288 26 22.57 8.47 KM Plot
KIRP rs17599899 chr11:55751315 A/T 0.000199 289 25.93 22.98 8.35 KM Plot
KIRP rs17693963 chr6:27710165 A/C 2.11E-8 289 25.63 27.27 13.45 KM Plot
KIRP rs17695758 chr6:27837183 T/C 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs17726231 chr16:84120291 G/A 1.87E-5 277 25.7 20.6 11.2 KM Plot
KIRP rs17737482 chr18:32752633 C/T 0.000184 289 25.93 25.02 11.07 KM Plot